2006–07 Slovenian Football Cup
| Tournament details | |
|---|---|
| Country | Slovenia | 
| Teams | 31 | 
| Final positions | |
| Champions | Koper (2nd title) | 
| Runners-up | Maribor | 
| Tournament statistics | |
| Matches played | 32 | 
| Goals scored | 106 (3.31 per match) | 
| Top goal scorer(s) | Miloš Đerić Dalibor Volaš Dimitar Makriev (5 goals each)  | 
The 2006–07 Slovenian Football Cup was the 16th season of the Slovenian Football Cup, Slovenia's football knockout competition. 20 lower league teams played in the first two rounds and the Slovenian PrvaLiga teams joined in the round of 16.
Koper, who were the defending champions having won the cup for the first time since the breakup of Yugoslavia in the previous season, won the title for the second time after defeating Maribor 1–0 in the final.