Trans-Proteomic Pipeline

TPP
Developer(s)Institute for Systems Biology
Initial release10 December 2004 (2004-12-10)
Stable release
5.0.0 / 11 October 2016 (2016-10-11)
Written inC++, Perl, Java
Operating systemLinux, Windows, OS X
TypeBioinformatics / Mass spectrometry software
LicenseGPL v. 2.0 and LGPL
WebsiteTPP Wiki

The Trans-Proteomic Pipeline (TPP) is an open-source data analysis software for proteomics developed at the Institute for Systems Biology (ISB) by the Ruedi Aebersold group under the Seattle Proteome Center. The TPP includes PeptideProphet, ProteinProphet, ASAPRatio, XPRESS and Libra.