U5 spliceosomal RNA
| U5 spliceosomal RNA | |
|---|---|
| Predicted secondary structure and sequence conservation of U5 | |
| Identifiers | |
| Symbol | U5 | 
| Rfam | RF00020 | 
| Other data | |
| RNA type | Gene; snRNA; splicing | 
| Domain(s) | Eukaryota | 
| GO | GO:0000351 GO:0000353 GO:0005682 GO:0046540 | 
| SO | SO:0000395 | 
| PDB structures | PDBe | 
U5 snRNA is a small nuclear RNA (snRNA) that participates in RNA splicing as a component of the spliceosome. It forms the U5 snRNP (small nuclear ribonucleoprotein) by associating with several proteins including Prp8 - the largest and most conserved protein in the spliceosome, Brr2 - a helicase required for spliceosome activation, Snu114, and the 7 Sm proteins. U5 snRNA forms a coaxially-stacked series of helices that project into the active site of the spliceosome. Loop 1, which caps this series of helices, forms 4-5 base pairs with the 5'-exon during the two chemical reactions of splicing. This interaction appears to be especially important during step two of splicing, exon ligation.