1999–2000 Czech 2. Liga

2. česká fotbalová liga
Season1999–2000
ChampionsSynot
PromotedSynot
Plzeň
RelegatedPoštorná
Frýdek-Místek
Matches played240
Goals scored651 (2.71 per match)
Top goalscorerVladimír Malár (24)
Average attendance1,305

The 1999–2000 Czech 2. Liga was the seventh season of the 2. česká fotbalová liga, the second tier of the Czech football league. Eventual winners, FC Synot clinched promotion to the Czech First League five matches before the end of the season.